威尼斯游戏大厅

罗静
教授/ jingluo#ynu.edu.cn/多倍化物种基因组学

个人简历

教育背景
1.1996年7月 学士学位 (云南大学微生物学专业);
2.2002年6月 博士学位 (中国科学院昆明动物研究所动物学专业群体遗传学方向)。
工作经历
1.2013/10-至今,云南大学,威尼斯游戏大厅,教授;
2.2008/4-2013/10,云南大学,威尼斯游戏大厅,副研究员;
3.2007/7-2008/3,云南大学,生物资源保护与利用重点实验室,客座;
4.2005/8-2006/11,中国科学院,水生生物研究所,副研究员;
5.2002/7-2005/6,德国Konstanz大学,生物系,博士后,导师:Axel Meyer;
6.2002/6-2002/7,中国科学院,昆明动物研究所,研究实习员。


主要研究方向 
1.多倍化物种基因组多样性,脊椎动物基因组多倍化及基因组学:鲤科鱼类、青藏高原特有鱼类的基因组学和转录组学;
2.特殊适应性鱼类的基因组演化,世界上最小鱼类Minifish基因组小型化及酸性适应机制的研究;
3.DNA结构和RNA调控功能相关的生物信息学。


实验室成员和在读研究生 
博士后:柴静;
博士研究生:黄峰;
硕士研究生:刘文福,林国亮,尹藩乾。


教授课程 
《生物化学》(本科生3-5学时,授课对象包括生物科学基地班、生物技术基地班、生态学和环境科学专业)
《生物化学实验》(本科生3学时,授课对象包括生物科学基地班、生物技术基地班、生物科学、生物技术等专业)


主要论文 

  1. Wei Zhou#, Ruilin Li#, …, Jing Luo*, Beifang Niu* (2017)  MetaSpark: a Spark-based distributed processing tool to recruit metagenomic reads to reference genomes. Bioinformatics 1-3.

  2. Li Ren#, Wuhui Li#, Min Tao#, Qinbo Qin#, Jing Luo, et al. (2016) Homoeologue expression insights into the basis of growth heterosis at the intersection of ploidy and hybridity in Cyprinidae. Scientific Reports 6:27040.

  3. Guoliang Lin#, Jing Chai#, …, Wei Zhou*, Jing Luo* (2016) VennPainter: A Tool for the Comparison and Identification of Candidate Genes Based on Venn Diagrams. PLos One 11(4): e0154315.

  4. Jing Wang#,   Bin Lu#, …, Jing Luo, …, Ziming Chen* (2016) Phylogenetic Relationships of Five Asian Schilbid Genera Including Clupisoma (Siluriformes: Schilbeidae). PLos One 60(17), 1471-1478.

  5. ShaoJun Liu#,   Jing Luo#,   Jing Chai#,   Li Ren#,   Yi Zhou#,   Feng Huang#,   Xiaochuan Liu#, …, Axel Meyer*, Ya-Ping Zhang* (2016) Genomic incompatibilities in the diploid and tetraploid offspring of the goldfish x the common carp cross. Proc Natl Acad Sci U S A 113(5), 1327-1332.

  6. Jing Chai#, Yuebo Su#, …, Jing Luo* (2015) The gap in research on polyploidization between plants and vertebrates: model systems and strategic challenges. Science Bulletin 60(17), 1471-1478.

  7. Jing Luo, et al. (2014) Tempo and mode of recurrent polyploidization in the Carassius auratus species complex (Cypriniformes, Cyprinidae). Heredity 112(4), 415-427.

  8. Wei Ma, …, Jing Luo* (2014) Allopolyploidization is Not So Simple: Evidence from the Origin of the Tribe Cyprinini (Teleostei: Cypriniformes). Current Molecular Medicine 14(10):1331~1338.

  9. Xiaoyun Wu, Jing Luo, et al. (2013) Molecular Phylogeography and Evolutionary History of Poropuntius huangchuchieni (Cyprinidae) in Southwest China. PLos One 8(11).

  10. Jing Wang, …, Jing Luo* (2013) Molecular phylogeny of European and African Barbus and their West Asian relatives in the Cyprininae (Teleostei: Cypriniformes) and orogenesis of the Qinghai-Tibetan Plateau. Chinese Science Bulletin 58(31), 3738-3746.

  11. Shuyan Wang, Jing Luo, et al. (2013) Origin of Chinese Goldfish and Sequential Loss of Genetic Diversity Accompanies New Breeds. PLos One 8(3), 59571-59578.

  12. ShanJin Wu, Jing Luo, et al. (2013) Ecological genetics of Chinese rhesus macaque in response to mountain building: all things are not equal. PLos One 8(2), 55315-55341.

  13. Jeffrey Zheng, Weiqiong Zhang, Jing Luo, et al. (2013) Variant map system to simulate complex properties of DNA interactions using binary sequences. Advances in Pure Mathematics 3(7A).

  14. Yun Gao, Shuyan Wang, Jing Luo, et al. (2012) Quaternary palaeoenvironmental oscillations drove the evolution of the Eurasian Carassius auratus complex (Cypriniformes, Cyprinidae). Journal of Biogeography 39(12), 2264-2278.

  15. Zhihui Li, …, Jing Luo* (2011) Polyploidization and epigenetics. Chinese Science Bulletin 56(3), 245-252.

  16. 李智慧, …, 罗静* (2010) 物种多倍化与表观遗传学, 科学通报, 35, 3358-3366.

  17. Dong-Ru Zhang, …, Jing Luo, et al. (2010) Genealogy and palaeodrainage basins in Yunnan Province: phylogeography of the Yunnan spiny frog, Nanorana yunnanensis (Dicroglossidae). Molecular Ecology, 19(16), 3406-3420.

  18. Ziming Chen, Jing Luo, et al. (2010) Subterranean Fishes of China, Biology of Subterranean Fishes, E.Trajano, M.E. Bichuette, B.G. Kapoor, Science Publishers, CRC Press, 397-413, 美国.

  19. Miao Ying-Chun, …, Jing Luo, Zhang Ya-Ping (2008) Isolation and characterization of microsatellite markers for the endangered Taxus yunnanensis. Conservation Genetics, 9(6), 1683-1685.

  20. Jing Luo, et al. (2007) PCR survey of hox genes in the goldfish Carassius auratus auratus. Journal of Experimental Zoology (Mol Dev Evol), 308B(3), 250-258.

  21. Jing Luo, et al. (2006) A BAC library for the goldfish Carassius auturatus auratus (Cyprinidae, Cypriniformes). Journal of Experimental Zoology, 306B(6),  567-574.

  22. C Fu, Jing Luo, et al. (2005) Phylogenetic relationships of salangid fishes (Osmeridae, Salangidae) with comments on phylogenetic placement of the salangids based on mitochondrial DNA sequences. Molecular Phylogenetics and Evolution, 35(1), 76-84.

  23. Jing Luo, et al. (2005) Strong Reproductive Skew Among Males in the Multiply Mated Swordtail Xiphophorus multilineatus (Teleostei). Journal of Heredity, 96(4), 346-355.

  24. Jing Luo, et al. (2004) Molecular phylogeny and biogeography of Oriental voles: genus Eothenomys (Muridae, Mammalia). Molecular Phylogenetics and Evolution, 33(2), 349-362.

  25. Akio Shinohara, … Jing Luo, et al. (2004) Evolution and Biogeography of Talpid Moles from Continental East Asia and the Japanese Islands Inferred from Mitochondrial and Nuclear Gene Sequences. Zoological Science, 21(12), 1177-1185.

  26. Suzuki H, Sato JJ, Tsuchiya K, Jing Luo, et al. (2003) Molecular Phylogeny of wood mice (Apodemus, Murindae) in East Asia. Biological Journal of the Linnean Society, 80(3), 469-481.

  27. Peter Savolainen, Ya-Ping Zhang,  Jing Luo, et al.  (2002) Genetic Evidence for an East Asian Origin of Domestic Dogs. Science, 298(5598), 1610-1613.

  28. Dong Niu, Yan Fu, Jing Luo, et al. (2002) The origin and genetic diversity of Chinese native chicken breeds. Biochemical Genetics, 40(5), 163-174.

  29. Zhao-Qing Yang, …, Jing Luo, Ya-Ping Zhang (2001) Identification of Sarcocystis hominis-like (Protozoa: Sarcocystidae) cyst in water buffalo (Bubalus bubalis) based on 18S rRNA gene sequences. The Journal of Parasitology, 87(4), 934-937.

  30. 孔庆鹏, 罗静, 黄顺友, 向余劲攻, 张亚平 (2000) 从线粒体细胞色素b探讨长臀鲃属三个种分类与进化的关系, 遗传, 06, 379-384.

  31. 罗静, 王蕊芳, 熊郁良, 吴世芳, 王婉瑜, 李东升, 朱绍文, 张亚平 (2000) 团花锦蛇、绿锦蛇和三索锦蛇的核型及Ag-NORs, 应用与环境生物学报, 03, 232-236.

  32. 罗静, 张亚平 (2000) 分子钟及其存在的问题, 人类学学报, 02, 151-159.

  33. 罗静, 杨君兴, 张亚平 (2000) 鱼类多样性的遗传基础, 动物学研究, 02, 158-164.

  34. 罗静, 张亚平, 朱春玲, 肖武汉, 黄顺友 (1999) 鲫鱼(Carassius auratus)遗传多样性研究, 云南大学学报(自然科学版), S3, 226-227.

  35. Jing Luo, et al. (1999) Genetic diversity in crucian carp (Carassius auratus). Biochemical Genetics, 37(9-10), 267-279.

  36. 罗静,张亚平,朱春玲,肖武汉 (1999) 鲫鱼遗传多样性的初步研究, 遗传学报, 01, 28-36.

  37. 罗静,王蕊芳,李东升,熊郁良 (1998) 菜花烙铁头核型的初步报道, 动物学研究, 06, 80-81.